Ulrik Fahnøe

Ulrik Fahnøe

Assistant Professor, Associate Professor

Member of:

    ORCID: 0000-0002-2527-5751

    Publication year:
    All
    1 - 66 out of 66Page size: 500
    1. 2024
    2. Published

      Host genetic variation guides hepacivirus clearance, chronicity, and liver fibrosis in mice

      Brown, A. J., Won, J. J., Wolfisberg, R., Fahnøe, U., Catanzaro, N., West, A., Moreira, F. R., Nogueira Batista, M., Ferris, M. T., Linnertz, C. L., Leist, S. R., Nguyen, C., De La Cruz, G., Midkiff, B. R., Xia, Y., Evangelista, M. D., Montgomery, S. A., Billerbeck, E., Bukh, J., Scheel, T. K. H. & 2 others, Rice, C. M. & Sheahan, T. P., 2024, In: Hepatology. 79, 1, p. 183-197

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Neutralizing antibody and CD8+ T cell responses following BA.4/5 bivalent COVID-19 booster vaccination in adults with and without prior exposure to SARS-CoV-2

      Underwood, Alexander Paul James, Sølund, C., Jacobsen, K., Binderup, A., Fernandez-Antunez, C., Mikkelsen, L. S., Inekci, D., Villadsen, S. L., Castruita, J. A. S., Pinholt, M., Fahnøe, Ulrik, Ramirez, S., Brix, L., Weis, Nina & Bukh, Jens, 2024, In: Frontiers in Immunology. 15, 14 p., 1353353.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. 2023
    5. Published

      An inactivated SARS-CoV-2 vaccine induced cross-neutralizing persisting antibodies and protected against challenge in small animals

      Offersgaard, Anna Falden, Duarte Hernandez, Carlos Rene, Feng, S., Marichal-Gallardo, P., Holmbeck, Kenn, Pihl, A. F., Fernandez-Antunez, C., Alzua, G. P., Hartmann, Katrine Top, Pham, Long, Zhou, Y., Gammeltoft, Karen Anbro, Fahnøe, Ulrik, Schneider, Uffe Vest, Pedersen, Gabriel Kristian, Jensen, Henrik Elvang, Christensen, Jan Pravsgaard, Ramirez Almeida, Santseharay, Bukh, Jens & Gottwein, Judith Margarete, 2023, In: iScience. 26, 2, 105949.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Characterization of multi-DAA resistance using a novel hepatitis C virus genotype 3a infectious culture system

      Fernandez-Antunez, C., Wang, K., Fahnøe, Ulrik, Mikkelsen, L. S., Gottwein, Judith Margarete, Bukh, Jens & Ramirez Almeida, Santseharay, 2023, In: Hepatology. 78, 2, p. 621-636 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Differential activity of nucleotide analogs against tick-borne encephalitis and yellow fever viruses in human cell lines

      Binderup, A., Galli, Andrea, Fossat, Nicolas Julien, Fernandez-Antunez, C., Mikkelsen, L. S., Rivera, Lizandro, Scheel, Troels Kasper Høyer, Fahnøe, Ulrik, Bukh, Jens & Ramirez, S., 2023, In: Virology. 585, p. 179-185 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Durability and breadth of neutralisation following multiple antigen exposures to SARS-CoV-2 infection and/or COVID-19 vaccination

      Underwood, Alexander Paul James, Sølund, C., Fernandez-Antunez, C., Villadsen, S. L., Mikkelsen, L. S., Fahnøe, Ulrik, Bollerup, S., Winckelmann, Anni Assing, Schneider, Uffe Vest, Binderup, A., Vizgirda, G., Sørensen, A. L., Vinten, C. N., Dalegaard, M. I., Ramirez Almeida, Santseharay, Weis, Nina & Bukh, Jens, 2023, In: EBioMedicine. 89, 104475.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Full-length sequence analysis of hepatitis C virus genotype 3b strains and development of an in vivo infectious 3b cDNA clone

      Bajpai, P. S., Collignon, Laura Maria F, Sølund, C., Madsen, L. W., Christensen, P. B., Øvrehus, A., Weis, Nina, Holmbeck, Kenn, Fahnøe, Ulrik & Bukh, Jens, 2023, In: Journal of Virology. 97, 12, 23 p., 00925.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Identification of novel neutralizing determinants for protection against HCV

      Alzua, G. P., Pihl, A. F., Offersgaard, Anna Falden, Velázquez-Moctezuma, R., Duarte Hernandez, Carlos Rene, Augestad, Elias Honerød, Fahnøe, Ulrik, Mathiesen, C. K., Krarup, H., Law, M., Prentø, Jannick, Bukh, Jens & Gottwein, Judith Margarete, 2023, In: Hepatology. 73, 3, p. 982-996

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Inactivated genotype 1a, 2a and 3a HCV vaccine candidates induced broadly neutralising antibodies in mice

      Alzua, G. P., Pihl, A. F., Offersgaard, Anna Falden, Duarte Hernandez, Carlos Rene, Duan, Z., Feng, S., Fahnøe, Ulrik, Sølund, C., Weis, Nina, Law, M., Prentø, Jannick, Christensen, Jan Pravsgaard, Bukh, Jens & Gottwein, Judith Margarete, 2023, In: Gut. 72, 3, p. 560-572

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Molecular Determinants of Mouse Adaptation of Rat Hepacivirus

      Wolfisberg, R., Holmbeck, Kenn, Billerbeck, E., Thorselius, Caroline Eva, Batista, M. N., Fahnøe, Ulrik, Lundsgaard, Emma Alberte, Kennedy, Matthew James, Nielsen, L., Rice, C. M., Bukh, Jens & Scheel, Troels Kasper Høyer, 2023, In: Journal of Virology. 97, 4, 17 p., e0181222.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Pre-existing, treatment-specific resistance-associated substitutions in hepatitis C virus genotype 1 and 3 and viral RNA titers during treatment with direct-acting antivirals

      Sølund, C., Pedersen, M. S., Fahnøe, Ulrik, Filskov, J., Jenssen, H., Weis, Nina, Schønning, Kristian & Bukh, Jens, 2023, In: APMIS. 131, 8, p. 426-433

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      Substitutions in SARS-CoV-2 Mpro Selected by Protease Inhibitor Boceprevir Confer Resistance to Nirmatrelvir

      Gammeltoft, Karen Anbro, Zhou, Y., Ryberg, Line Abildgaard, Pham, Long, Binderup, A., Duarte Hernandez, Carlos Rene, Offersgaard, Anna Falden, Fahnøe, Ulrik, Peters, G. H. J., Ramirez Almeida, Santseharay, Bukh, Jens & Gottwein, Judith Margarete, 2023, In: Viruses. 15, 9, 17 p., 1970.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. 2022
    16. Published

      Establishment of high-titer HCV and SARS-CoV-2 production in a scalable packed-bed bioreactor for inactivated vaccines inducing neutralizing antibodies in animals

      Offersgaard, A. F., Hernandez, C. R. D., Finne Pihl, A., Feng, S., Marichal-Gallardo, P., Venkatesan, N. P., Lin, X., Fernandez-Antunez, C., Pena Alzua, G., Costa, R., Hartmann, K. T., Pham, L., Zhou, Y., Gammeltoft, K. A., Fahnøe, U., Scheel, T. K. H., Schneider, U. V., Jensen, H. E., Christensen, J. P., Ramirez Almeida, S. & 4 others, Reichl, U., Genzel, Y., Bukh, Jens & Gottwein, Judith Margarete, 6 Jul 2022.

      Research output: Contribution to conference › Poster › Communication

    17. Published

      Establishment of high-titer HCV and SARS-CoV-2 production in a scalable packed-bed bioreactor for inactivated vaccines inducing neutralizing antibodies in animals

      Offersgaard, A. F., Hernandez, C. R. D., Finne Pihl, A., Feng, S., Marichal-Gallardo, P., Holmbeck, K., Venkatesan, N. P., Lin, X., Fernandez-Antunez, C., Pena Alzua, G., Costa, R., Hartmann, K. T., Pham, L., Zhou, Y., Gammeltoft, K. A., Fahnøe, U., Scheel, T. K. H., Schneider, U. V., Jensen, H. E., Christensen, J. P. & 5 others, Ramirez Almeida, Santseharay, Reichl, U., Genzel, Y., Bukh, J. & Gottwein, Judith Margarete, 6 Jul 2022.

      Research output: Contribution to conference › Conference abstract for conference › Communication

    18. Published

      A distinct dexamethasone-dependent gene expression profile in the lungs of COVID-19 patients

      Fahnøe, Ulrik, Ronit, A., Berg, Ronan Martin Griffin, Jørgensen, S. E., Mogensen, T. H., Underwood, Alexander Paul James, Scheel, Troels Kasper Høyer, Bukh, Jens & Plovsing, R. R., 2022, In: The Journal of Infectious Diseases. 226, 12, p. 2137–2141

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Analysis of Neutralization Titers against SARS-CoV-2 in Health-Care Workers Vaccinated with Prime-Boost mRNA–mRNA or Vector–mRNA COVID-19 Vaccines

      Sølund, C., Underwood, Alexander Paul James, Fernandez-Antunez, C., Bollerup, S., Mikkelsen, L. S., Villadsen, S. L., Fahnøe, Ulrik, Winckelmann, Anni Assing, Feng, S., Nørløv Vinten, C. A., Dalegaard, M. I., Vizgirda, G., Sørensen, A. L., Ramirez Almeida, Santseharay, Bukh, Jens & Weis, Nina, 2022, In: Vaccines. 10, 1, 75.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      HCV genome-wide analysis for development of efficient culture systems and unravelling of antiviral resistance in genotype 4

      Pham, Long, Pedersen, M. S., Fahnøe, Ulrik, Fernandez-Antunez, C., Humes, D., Schønning, Kristian, Ramirez Almeida, Santseharay & Bukh, Jens, 2022, In: Gut. 71, p. 627-642 20323585.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      High recombination rate of hepatitis C virus revealed by a green fluorescent protein reconstitution cell system

      Galli, Andrea, Fahnøe, Ulrik & Bukh, Jens, 2022, In: Virus Evolution. 8, 1, veab106.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Neutralization and receptor use of infectious culture–derived rat hepacivirus as a model for HCV

      Wolfisberg, R., Thorselius, Caroline Eva, Salinas, E., Elrod, E., Trivedi, S., Nielsen, L., Fahnøe, Ulrik, Kapoor, A., Grakoui, A., Rice, C. M., Bukh, Jens, Holmbeck, Kenn & Scheel, Troels Kasper Høyer, 2022, In: Hepatology. 76, 5, p. 1506-1519

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Nirmatrelvir-resistant SARS-CoV-2 variants with high fitness in an infectious cell culture system

      Zhou, Y., Gammeltoft, Karen Anbro, Ryberg, Line Abildgaard, Pham, Long, Tjørnelund, H. D., Binderup, A., Duarte Hernandez, Carlos Rene, Fernandez-Antunez, C., Offersgaard, Anna Falden, Fahnøe, Ulrik, Peters, G. H. J., Ramirez Almeida, Santseharay, Bukh, Jens & Gottwein, Judith Margarete, 2022, In: Science Advances. 8, 51, eadd7197.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Novel HCV Genotype 4d Infectious Systems and Assessment of Direct-Acting Antivirals and Antibody Neutralization

      Pham, Long, Velázquez-Moctezuma, R., Fahnøe, Ulrik, Collignon, Laura Maria F, Bajpai, P., Sølund, C., Weis, Nina, Holmbeck, Kenn, Prentø, Jannick & Bukh, Jens, 2022, In: Viruses. 14, 11, 2527.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Novel hepatitis B virus reverse transcriptase mutations in patients with sustained viremia despite long-term tenofovir treatment

      Winckelmann, Anni Assing, Fahnøe, Ulrik, Bajpai, P. S., Dalegaard, M. I., Lundh, A., Ryom, L., Bukh, Jens & Weis, Nina, 2022, In: Journal of Clinical Virology. 150-151, 6 p., 105159.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Versatile SARS-CoV-2 Reverse-Genetics Systems for the Study of Antiviral Resistance and Replication

      Fahnøe, Ulrik, Pham, Long, Fernandez-Antunez, C., Costa, Rui, Rivera, Lizandro, Galli, Andrea, Feng, S., Mikkelsen, L. S., Gottwein, Judith Margarete, Scheel, Troels Kasper Høyer, Ramirez Almeida, Santseharay & Bukh, Jens, 2022, In: Viruses. 14, 2, 172.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. 2021
    28. Published

      Characterization of a novel hepatitis C virus genotype 1 subtype from a patient failing 4 weeks of glecaprevir-pibrentasvir treatment

      Pedersen, M. S., Fahnøe, Ulrik, Madsen, L. W., Christensen, P. B., Øvrehus, A. & Bukh, Jens, 2021, In: Microbiology resource announcements. 10, 41, e00755.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Efficacy of ion-channel inhibitors amantadine, memantine and rimantadine for the treatment of SARS-CoV-2 in vitro

      Zhou, Y., Gammeltoft, Karen Anbro, Galli, Andrea, Offersgaard, Anna Falden, Fahnøe, Ulrik, Ramirez Almeida, Santseharay, Bukh, Jens & Gottwein, Judith Margarete, 2021, In: Viruses. 13, 10, 2082.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      Global evolutionary analysis of chronic hepatitis C patients revealed significant effect of baseline viral resistance, including novel non-target sites, for DAA-based treatment and retreatment outcome

      Fahnøe, Ulrik, Pedersen, M. S., Sølund, C., Ernst, A., Krarup, H. B., Røge, B. T., Christensen, P. B., Laursen, A. L., Gerstoft, Jan, Thielsen, P., Madsen, Lone Galmstrup, Pedersen, A. G., Schønning, Kristian, Weis, Nina & Bukh, Jens, 2021, In: Journal of Viral Hepatitis. 28, 2, p. 302-316

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Hepatitis C Virus Protease Inhibitors Show Differential Efficacy and Interactions with Remdesivir for Treatment of SARS-CoV-2 in Vitro

      Gammeltoft, Karen Anbro, Zhou, Y., Duarte Hernandez, C. R., Galli, Andrea, Offersgaard, Anna Falden, Costa, Rui, Pham, Long, Fahnøe, Ulrik, Feng, S., Scheel, Troels Kasper Høyer, Ramirez Almeida, Santseharay, Bukh, Jens & Gottwein, Judith Margarete, 2021, In: Antimicrobial Agents and Chemotherapy. 65, 9, e02680-20.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      In vitro efficacy of artemisinin-based treatments against SARS-CoV-2

      Zhou, Y., Gilmore, K., Ramirez Almeida, Santseharay, Settels, E., Gammeltoft, Karen Anbro, Pham, Long, Fahnøe, Ulrik, Feng, S., Offersgaard, Anna Falden, Trimpert, J., Bukh, Jens, Osterrieder, K., Gottwein, Judith Margarete & Seeberger, P. H., 2021, In: Scientific Reports. 11, 14571.

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      Inferior cure rate in pilot study of 4-week glecaprevir/pibrentasvir treatment with or without ribavirin of chronic hepatitis C

      Madsen, L. W., Christensen, P. B., Fahnøe, Ulrik, Pedersen, M. S., Bukh, Jens & Øvrehus, A., 2021, In: Liver International. 41, 11, p. 2601-2610

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Neutralisation titres against SARS-CoV-2 are sustained 6 months after onset of symptoms in individuals with mild COVID-19

      Underwood, Alexander Paul James, Sølund, C., Fernandez-Antunez, C., Villadsen, S. L., Winckelmann, A. A., Bollerup, S., Mikkelsen, L. S., Sørensen, A. L., Feng, S., Fahnøe, Ulrik, Lassauniere, R., Fomsgaard, A., Ramirez Almeida, Santseharay, Weis, Nina & Bukh, Jens, 2021, In: EBioMedicine. 71, 103519.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      Overcoming culture restriction for SARS-CoV-2 in human cells facilitates the screening of compounds inhibiting viral replication

      Ramirez Almeida, Santseharay, Fernandez-Antunez, C., Galli, Andrea, Underwood, Alexander Paul James, Pham, Long, Ryberg, Line Abildgaard, Feng, S., Pedersen, M. S., Mikkelsen, L. S., Belouzard, S., Dubuisson, J., Sølund, C., Weis, Nina, Gottwein, Judith Margarete, Fahnøe, Ulrik & Bukh, Jens, 2021, In: Antimicrobial Agents and Chemotherapy. 65, 7, 20 p., e00097-21.

      Research output: Contribution to journal › Journal article › Research › peer-review

    36. Published

      Pathogenesis, miR-122 gene-regulation, and protective immune responses after acute equine hepacivirus infection

      Tomlinson, J. E., Wolfisberg, R., Fahnøe, Ulrik, Patel, R. S., Trivedi, S., Kumar, A., Sharma, H., Nielsen, L., McDonough, S. P., Bukh, Jens, Tennant, B. C., Kapoor, A., Rosenberg, B. R., Rice, C. M., Divers, T. J., Van de Walle, G. R. & Scheel, Troels Kasper Høyer, 2021, In: Hepatology. 74, 3, p. 1148-1163

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Sars-cov-2 production in a scalable high cell density bioreactor

      Offersgaard, Anna Falden, Hernandez, C. R. D., Pihl, A. F., Costa, Rui, Venkatesan, N. P., Lin, X., Pham, Long, Feng, S., Fahnøe, Ulrik, Scheel, Troels Kasper Høyer, Ramirez Almeida, Santseharay, Reichl, U., Bukh, Jens, Genzel, Y. & Gottwein, Judith Margarete, 2021, In: Vaccines. 9, 7, 706.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. 2020
    39. Published

      Analysis of virus population profiles within pigs infected with virulent Classical Swine Fever viruses; evidence for bottlenecks in transmission but absence of tissue specific virus variants

      Johnston, C. M., Fahnøe, Ulrik, Lohse, L., Bukh, Jens, Belsham, Graham John & Rasmussen, T. B., 2020, In: Journal of Virology. 94, 19, 20 p., e01119-20.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. Published

      Development of a downstream process for the production of an inactivated whole hepatitis C virus vaccine

      Lothert, K., Offersgaard, A. F., Pihl, A. F., Mathiesen, C. K., Jensen, T. B., Alzua, G. P., Fahnøe, Ulrik, Bukh, Jens, Gottwein, Judith Margarete & Wolff, M. W., 2020, In: Scientific Reports. 10, 13 p., 16261.

      Research output: Contribution to journal › Journal article › Research › peer-review

    41. Published

      Efficient culture of SARS-CoV-2 in human hepatoma cells enhances viability of the virus in human lung cancer cell lines permitting the screening of antiviral compounds

      Ramirez Almeida, Santseharay, Fernandez-Antunez, C., Pham, Long, Ryberg, Line Abildgaard, Feng, S., Pedersen, M. S., Mikkelsen, L. S., Belouzard, S., Dubuisson, J., Gottwein, Judith Margarete, Fahnøe, Ulrik & Bukh, Jens, 2020, bioRxiv.

      Research output: Working paper › Preprint › Research

    42. Published

      Equine pegiviruses cause persistent infection of bone marrow and are not associated with hepatitis

      Tomlinson, J. E., Wolfisberg, R., Fahnøe, Ulrik, Sharma, H., Renshaw, R. W., Nielsen, L., Nishiuchi, E., Holm, C., Dubovi, E., Rosenberg, B. R., Tennant, B. C., Bukh, Jens, Kapoor, A., Divers, T. J., Rice, C. M., Van de Walle, G. R. & Scheel, Troels Kasper Høyer, 2020, In: P L o S Pathogens. 16, 7, 23 p., e1008677.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Identification of specific amino acid residues in the border disease virus glycoprotein E2 that modify virus growth in pig cells but not in sheep cells

      Fahnøe, Ulrik, Deng, Y., Davids, N. A., Lohse, L., Bukh, Jens, Belsham, Graham John & Rasmussen, T. B., 2020, In: The Journal of general virology. 101, 11, p. 1170-1181

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Mutations Identified in the Hepatitis C Virus (HCV) Polymerase of Patients with Chronic HCV Treated with Ribavirin Cause Resistance and Affect Viral Replication Fidelity

      Mejer, N., Fahnøe, Ulrik, Galli, Andrea, Ramirez Almeida, Santseharay, Weiland, O., Benfield, Thomas & Bukh, Jens, 2020, In: Antimicrobial Agents and Chemotherapy. 64, 12

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Ribavirin inhibition of cell-culture infectious hepatitis C genotype 1-3 viruses is strain-dependent

      Mejer, N., Galli, Andrea, Ramirez Almeida, Santseharay, Fahnøe, Ulrik, Benfield, Thomas & Bukh, Jens, 2020, In: Virology. 540, p. 132-140 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. 2019
    47. Published

      Evolutionary Pathways to Persistence of Highly Fit and Resistant Hepatitis C Virus Protease Inhibitor Escape Variants

      Jensen, S. B., Fahnøe, U., Pham, L. V., Serre, S. B. N., Tang, Q., Ghanem, L., Pedersen, M. S., Ramirez, S., Humes, D., Pihl, A. F., Filskov, J., Sølund, C. S., Dietz, J., Fourati, S., Pawlotsky, J. M., Sarrazin, C., Weis, N., Schønning, K., Krarup, H., Bukh, J. & 1 others, Gottwein, Judith Margarete, 2019, In: Hepatology. 70, 3, p. 771-787 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    48. Published

      Full-length open reading frame amplification of hepatitis C virus

      Fahnøe, Ulrik & Bukh, Jens, 2019, Hepatitis C Virus Protocols. Humana Press, p. 85-91 7 p. (Methods in Molecular Biology, Vol. 1911).

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    49. Published

      HCV genotype 1-6 NS3 residue 80 substitutions impact protease inhibitor activity and promote viral escape

      Pham, Long, Jensen, S. B., Fahnøe, Ulrik, Pedersen, M. S., Tang, Q., Ghanem, L., Ramirez Almeida, Santseharay, Humes, D., Serre, S. B. N., Schønning, Kristian, Bukh, Jens & Gottwein, Judith Margarete, 2019, In: Journal of Hepatology. 70, 3, p. 388-397

      Research output: Contribution to journal › Journal article › Research › peer-review

    50. Published

      Virus adaptation and selection following challenge of animals vaccinated against classical swine fever virus

      Fahnøe, Ulrik, Pedersen, A. G., Johnston, C. M., Orton, R. J., Höper, D., Beer, M., Bukh, Jens, Belsham, Graham John & Rasmussen, T. B., 2019, In: Viruses. 11, 10, 932.

      Research output: Contribution to journal › Journal article › Research › peer-review

    51. 2018
    52. Published

      A near full-length open reading frame next generation sequencing assay for genotyping and identification of resistance-associated variants in hepatitis C virus

      Pedersen, M. S., Fahnøe, Ulrik, Hansen, T. A., Pedersen, A. G., Jenssen, H., Bukh, Jens & Schønning, Kristian, 2018, In: Journal of Clinical Virology. 105, p. 49-56 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    53. Published

      Direct acting antiviral treatment of chronic hepatitis C in Denmark: factors associated with and barriers to treatment initiation

      Sølund, C., Hallager, S., Pedersen, M. S., Fahnøe, Ulrik, Ernst, A., Krarup, H. B., Røge, B. T., Christensen, P. B., Laursen, A. L., Gerstoft, Jan, Bélard, E., Madsen, Lone Galmstrup, Schønning, Kristian, Pedersen, A. G., Bukh, Jens, Weis, Nina & DANHEP Group, D. G., 2018, In: Scandinavian Journal of Gastroenterology. 53, 7, p. 849-856 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    54. Published

      HCV Genotype 6a Escape from and Resistance to Velpatasvir, Pibrentasvir, and Sofosbuvir in Robust Infectious Cell Culture Models

      Pham, Long, Ramirez Almeida, Santseharay, Gottwein, Judith Margarete, Fahnøe, Ulrik, Li, Y., Pedersen, J. & Bukh, Jens, 2018, In: Gastroenterology. 154, 8, p. 2194-2208.e12

      Research output: Contribution to journal › Journal article › Research › peer-review

    55. Published

      High density Huh7.5 cell hollow fiber bioreactor culture for high-yield production of hepatitis C virus and studies of antivirals

      Pihl, A. F., Offersgaard, A. F., Mathiesen, C. K., Prentø, Jannick, Fahnøe, Ulrik, Krarup, H., Bukh, Jens & Gottwein, Judith Margarete, 2018, In: Scientific Reports. 8, 1, 13 p., 17505.

      Research output: Contribution to journal › Journal article › Research › peer-review

    56. Published

      Outcome and adverse events in patients with chronic hepatitis C treated with direct-acting antivirals: A clinical randomized study

      Sølund, C., cgl303, cgl303, Mössner, B., Laursen, A. L., Røge, B. T., Kjær, M. S., Gerstoft, Jan, Christensen, P. B., Pedersen, M. S., Schønning, Kristian, Fahnøe, Ulrik, Bukh, Jens & Weis, Nina, 2018, In: European Journal of Gastroenterology and Hepatology. 30, 10, p. 1177-1186 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    57. Published

      Ribavirin-induced mutagenesis across the complete open reading frame of hepatitis C virus genotypes 1a and 3a

      Mejer, N., Fahnøe, Ulrik, Galli, Andrea, Ramirez Almeida, Santseharay, Benfield, Thomas & Bukh, Jens, 2018, In: Journal of General Virology. 99, 8, p. 1066-1077 12 p., 001095.

      Research output: Contribution to journal › Journal article › Research › peer-review

    58. Published

      Strategy for efficient generation of numerous full-length cDNA clones of classical swine fever virus for haplotyping

      Johnston, C. M., Fahnøe, Ulrik, Belsham, G. J. & Rasmussen, T. B., 2018, In: BMC Genomics. 19, 9 p., 600.

      Research output: Contribution to journal › Journal article › Research › peer-review

    59. 2017

    60. Distinct roles for the IIId2 sub-domain in pestivirus and picornavirus internal ribosome entry sites

      Willcocks, M. M., Zaini, S., Chamond, N., Ulryck, N., Allouche, D., Rajagopalan, N., Davids, N. A., Fahnøe, Ulrik, Hadsbjerg, J., Rasmussen, T. B., Roberts, L. O., Sargueil, B., Belsham, G. J. & Locker, N., Dec 2017, In: Nucleic Acids Research. 45, 22, p. 13016–13028

      Research output: Contribution to journal › Journal article › Research › peer-review

    61. Published

      Deoxynucleoside salvage in fission yeast allows rescue of ribonucleotide reductase deficiency but not Spd1-mediated inhibition of replication

      Fleck, O., Fahnøe, Ulrik, Løvschal, K. V., Gasasira, M. U., Marinova, I. N., Kragelund, Birthe Brandt, Carr, A. M., Hartsuiker, E., Holmberg, Christian & Nielsen, Olaf, 25 Apr 2017, In: Genes. 8, 5, 14 p., 128.

      Research output: Contribution to journal › Journal article › Research › peer-review

    62. Determinants of the VP1/2A junction cleavage by the 3C protease in foot-and-mouth disease virus-infected cells

      Kristensen, Thea, Normann, P., Gullberg, M., Fahnøe, Ulrik, Polacek, C., Rasmussen, T. B. & Belsham, G. J., 1 Mar 2017, In: Journal of General Virology. 98, 3, p. 385-395 11 p., 000664.

      Research output: Contribution to journal › Journal article › Research › peer-review

    63. Published

      Mouse models of acute and chronic hepacivirus infection

      Billerbeck, E., Wolfisberg, R., Fahnøe, Ulrik, Xiao, J. W., Quirk, C., Luna, J. M., Cullen, J. M., Hartlage, A. S., Chiriboga, L., Ghoshal, K., Lipkin, W. I., Bukh, Jens, Scheel, Troels Kasper Høyer, Kapoor, A. & Rice, C. M., 2017, In: Science. 357, 6347, p. 204-208 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    64. 2016

    65. Sequence adaptations during growth of rescued classical swine fever viruses in cell culture and within infected pigs

      Hadsbjerg, J., Friis, M. B., Fahnøe, Ulrik, Nielsen, J., Belsham, G. J. & Rasmussen, T. B., 30 Aug 2016, In: Veterinary Microbiology. 192, p. 123-134 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    66. A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome

      Hagberg, E. E., Krarup, A., Fahnøe, Ulrik, Larsen, Lars, Dam-Tuxen, R. & Pedersen, A. G., Aug 2016, In: Journal of Virological Methods. 234, p. 43-51 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    67. 2015

    68. Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction

      Fahnøe, Ulrik, Pedersen, A. G., Dräger, C., Orton, R. J., Blome, S., Höper, D., Beer, M. & Rasmussen, T. B., 2015, In: PLOS ONE. 10, 10, e0140912.

      Research output: Contribution to journal › Journal article › Research › peer-review

    69. 2014

    70. Rescue of the highly virulent classical swine fever virus strain "Koslov" from cloned cDNA and first insights into genome variations relevant for virulence

      Fahnøe, Ulrik, Pedersen, A. G., Risager, P. C., Nielsen, J., Belsham, G. J., Höper, D., Beer, M. & Rasmussen, T. B., Nov 2014, In: Virology. 468-470, p. 379-387 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    71. Complete genome sequence of classical Swine Fever virus genotype 2.2 strain bergen

      Fahnøe, Ulrik, Lohse, L., Becher, P. & Rasmussen, T. B., 29 May 2014, In: Genome Announcements. 2, 3, e00483-14 .

      Research output: Contribution to journal › Journal article › Research › peer-review

    72. Complete genome sequence of border disease virus genotype 3 strain gifhorn

      Fahnøe, Ulrik, Höper, D., Schirrmeier, H., Beer, M. & Rasmussen, T. B., 16 Jan 2014, In: Genome Announcements. 2, 1, 2 p., e01142-13.

      Research output: Contribution to journal › Journal article › Research › peer-review

    73. Published

      Spd2 assists Spd1 in the modulation of ribonucleotide reductase architecture but does not regulate deoxynucleotide pools

      Vejrup-Hansen, R., Fleck, O., Landvad, K., Fahnøe, Ulrik, Broendum, S. S., Schreurs, A., Kragelund, Birthe Brandt, Carr, A. M., Holmberg, Christian & Nielsen, Olaf, 2014, In: Journal of Cell Science. 127, p. 2460-2470 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    74. Studies on genetic diversity of bovine viral diarrhea viruses in Danish cattle herds

      Nagy, A., Fahnøe, Ulrik, Rasmussen, T. B. & Uttenthal, A., 2014, In: Virus Genes. 48, 2, p. 376-80 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    75. 2013

    76. A fast and robust method for full genome sequencing of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Type 1 and Type 2

      Kvisgaard, L. K., Hjulsager, C. K., Fahnøe, Ulrik, Breum, S. Ø., Ait-Ali, T. & Larsen, Lars, Nov 2013, In: Journal of Virological Methods. 193, 2, p. 697-705 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    77. Published

      Analysis of classical swine fever virus RNA replication determinants using replicons

      Risager, P. C., Fahnøe, Ulrik, Gullberg, M., Rasmussen, T. B. & Belsham, G. J., Aug 2013, In: The Journal of general virology. 94, Pt 8, p. 1739-48 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    78. Efficient generation of recombinant RNA viruses using targeted recombination-mediated mutagenesis of bacterial artificial chromosomes containing full-length cDNA

      Rasmussen, T. B., Risager, P. C., Fahnøe, Ulrik, Friis, M. B., Belsham, G. J., Höper, D., Reimann, I. & Beer, M., 2013, In: BMC Genomics. 14, p. 1-10 819.

      Research output: Contribution to journal › Journal article › Research › peer-review

    ID: 128837339